PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023535130.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 235aa MW: 25845.5 Da PI: 8.2208

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023535130.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.1	1e-10	79	126	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f eL ++l + + +K +Ka+iL Av+ +++L XP_023535130.1 79 SKACREKLRRDRLNDKFLELGSILDPG---RLPKTDKAAILVDAVRMVNQL 126 6789********************8...89*************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MVSPENPNWL FDYSLIDDIP VPDANFPVMS SSFSWAVQPF NGSPDAGVEI DGSLADLDGR 60 LESGSKKRVR SESCSASSSK ACREKLRRDR LNDKFLELGS ILDPGRLPKT DKAAILVDAV 120 RMVNQLRSEA RKLKESNSSL QEKVKELKAE KNELHGGRQK LKADKEQLEQ QVKSMPAQPG 180 FLPPPPIPTF ASQGQAPGNK LVLFVGYHPG VAMWQFMLPA AVDTSQDHVL RPPVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	1e-80	bHLH family protein