PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023534954.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 421aa MW: 45890.2 Da PI: 8.4771 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.6 | 5.9e-05 | 308 | 346 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq XP_023534954.1 308 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 346 7788899*********998.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 421 aa Download sequence |
MDSAANLHQL QEQLLVPSSS SSSSSLPVVS SCLGLGSSHG WTPNVSPNNN SCNYNPRIFN 60 GFASFPSRSD CGQKNTNSSS MLQDLGFQWS GAVNTGTFFT QSLHDPQAGK IKDEISSFPK 120 FTQILNNPSS TNQDFHHFPS TNQVKNNSNN DSDLNDLTNK LLIKTLISSG CQINGGDPTK 180 PNRPHFPQIY PSINVSNWNL SSPAPAFSNS LDLNLQTPAD MLLSAANFSH SPDSFGSFKQ 240 TLSDFQDQMH PPPASLPCIP NKRKPFSTEA TEPKRPCNSM EPSLNQQSPP LKKSRLDSRA 300 SCPPFKVRKE KLGDRIAALQ QLVAPFGKTD TASVLMEAIG YIKFLQNQTL SVPYMKPSSN 360 KITKPTYRST VEDGNEERPN RDLRSRGLCL VPLGCLSYVT GDGGGIWPPT GFNGGTLDKY 420 N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27660.1 | 4e-50 | bHLH family protein |