PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534953.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 423aa    MW: 46118.5 Da    PI: 8.3207
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.65.9e-053083461255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_023534953.1 308 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 346
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MDSAANLHQL QEQLLVPSSS SSSSSLPVVS SCLGLGSSHG WTPNVSPNNN SCNYNPRIFN  60
GFASFPSRSD CGQKNTNSSS MLQDLGFQWS GAVNTGTFFT QSLHDPQAGK IKDEISSFPK  120
FTQILNNPSS TNQDFHHFPS TNQVKNNSNN DSDLNDLTNK LLIKTLISSG CQINGGDPTK  180
PNRPHFPQIY PSINVSNWNL SSPAPAFSNS LDLNLQTPAD MLLSAANFSH SPDSFGSFKQ  240
TLSDFQDQMH PPPASLPCIP NKRKPFSTEA TEPKRPCNSM EPSLNQQSPP LKKSRLDSRA  300
SCPPFKVRKE KLGDRIAALQ QLVAPFGKTD TASVLMEAIG YIKFLQNQVE TLSVPYMKPS  360
SNKITKPTYR STVEDGNEER PNRDLRSRGL CLVPLGCLSY VTGDGGGIWP PTGFNGGTLD  420
KYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-53bHLH family protein