PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534838.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 568aa MW: 61566.3 Da PI: 9.3513

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534838.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.2	1.8e-08	205	249	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l av+++G g+W+ I + g Rt+ q+ rw XP_023534838.1 205 RKPWSKTEDLELMAAVEKYGEGNWANILKadFKG-DRTASQLSQRW 249 789************************7621455.89999988888 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MIEIKEKPKK GTISNEDSSA VLERYSVRTI FTLLREVAHV SEVRIDWDKL VKNTSTGISN 60 VREYQLLWRH LAYRHTLLEN VDSVTDPLDY DSDLDFEIEP FPSVSNESLN EAAACVKVLI 120 ANGIPSESDV PSSSVVEAPL TIGISSNSRP FRASLENPQS ACLMQGMYVT FPISVQRQPL 180 PTPSATEVFD VNGAAGGNAA SRKRRKPWSK TEDLELMAAV EKYGEGNWAN ILKADFKGDR 240 TASQLSQRWS IIRKRRGKLS VGANTTSTQT SKAQIDAAHR ALSLALDLPV NNSKSANSNM 300 NSSTVSSTSG AEAPVQIQNQ SPQVLVPLRP LQVKPLPSAA KSGINTAKNT LMMKSTHNSD 360 SIVRATAVAA GARIVSPSDA ASLMKAAQTK NAIHIKSKCV SSIQPPVLGN ASTHLDARPS 420 VHYISTGRTA TPGSNYVGGK STMAGKYSMK YVSPKAPYNC STAVSTNPPS NQISPTTESP 480 LKQEVKSSEE CKISKPIITS KDDFRENRTV VRDVFASQIS DWESGSRSTC IENQNTSLNM 540 EIDENDIKAA CPKQDENKTK ANDVKIRG

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MIEIKEKPKK GTISNEDSSA VLERYSVRTI FTLLREVAHV SEVRIDWDKL VKNTSTGISN  60
VREYQLLWRH LAYRHTLLEN VDSVTDPLDY DSDLDFEIEP FPSVSNESLN EAAACVKVLI  120
ANGIPSESDV PSSSVVEAPL TIGISSNSRP FRASLENPQS ACLMQGMYVT FPISVQRQPL  180
PTPSATEVFD VNGAAGGNAA SRKRRKPWSK TEDLELMAAV EKYGEGNWAN ILKADFKGDR  240
TASQLSQRWS IIRKRRGKLS VGANTTSTQT SKAQIDAAHR ALSLALDLPV NNSKSANSNM  300
NSSTVSSTSG AEAPVQIQNQ SPQVLVPLRP LQVKPLPSAA KSGINTAKNT LMMKSTHNSD  360
SIVRATAVAA GARIVSPSDA ASLMKAAQTK NAIHIKSKCV SSIQPPVLGN ASTHLDARPS  420
VHYISTGRTA TPGSNYVGGK STMAGKYSMK YVSPKAPYNC STAVSTNPPS NQISPTTESP  480
LKQEVKSSEE CKISKPIITS KDDFRENRTV VRDVFASQIS DWESGSRSTC IENQNTSLNM  540
EIDENDIKAA CPKQDENKTK ANDVKIRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	3e-68	MYB_related family protein