PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023534789.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 309aa MW: 33911.5 Da PI: 8.8568 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.6 | 2.4e-12 | 51 | 95 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++++++a +++ + Wk+I + +g +t q++s+ qky XP_023534789.1 51 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 95 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 309 aa Download sequence |
MVSNNPNPSE GFYLDPSGMA LPGLGPFATT MAASEDMSKK IRKPYTITKS RESWTEPEHD 60 KFLEALQLFD RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ KTGGGEHLPP PRPKRKAAHP 120 YPQKASKNVA MPSQVSGSFP STSPLVEPGC IRRPESSSIP ACPATGGAVS SWMVNSVQPP 180 NSAQVPTTTN ICCSSTESPS KARPLVETTD QGSNNHSLRV LPDFAQVYSF IGSVFDPNTS 240 GHLQKLKRMD PIDVETVLLL MRNLSINLIS PDFEDHRKLL SSYEIDSGPI PHGDINKYVT 300 DHKPSLVSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G52660.1 | 1e-115 | MYB_related family protein |