PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023534743.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 121aa MW: 14320.5 Da PI: 7.2355 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.3 | 3.6e-08 | 69 | 108 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +T++E++l+ + +k+ G + W++Ia +++ gR ++++ +w XP_023534743.1 69 MTAQEEDLIHRMHKLIGDR-WDLIAGRIP-GRKPEEIERYWI 108 69***************99.*********.***********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MDNHRSQQQA KTTPLESEGS FHLLDVLFFL SPITHHEVGL FFMIFSPFLK FVACYLTEVS 60 STRWQFITMT AQEEDLIHRM HKLIGDRWDL IAGRIPGRKP EEIERYWIMT HLEGFAVRRR 120 G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53200.1 | 1e-31 | MYB_related family protein |