PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023534708.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | YABBY | ||||||||
Protein Properties | Length: 169aa MW: 18817.4 Da PI: 9.1747 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 216.4 | 9.1e-67 | 6 | 158 | 5 | 169 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 +se+vCyv+CnfCntilavsvP +s+f++vtvrCGhCt+llsvn+ + q+l+ ++ + +++ l + e++ k +++++ s+ s XP_023534708.1 6 MASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCTNLLSVNMGASLQVLPPQEG---HKQPQ----LTSPEDSSKDRGSSSSKCSKIGSL- 92 689**************************************************99985...22222....222222222222222222222222. PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 e+ +++ r+pp irPPekrqr+Psaynrfik eiqrika+nPdishreafs+aaknWah+P+ih g XP_023534708.1 93 ---ESAERDQHRIPP-IRPPEKRQRIPSAYNRFIKAEIQRIKANNPDISHREAFSTAAKNWAHLPHIHLG 158 ...344555566667.9***************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MSLDMMASER VCYVHCNFCN TILAVSVPCN SMFTLVTVRC GHCTNLLSVN MGASLQVLPP 60 QEGHKQPQLT SPEDSSKDRG SSSSKCSKIG SLESAERDQH RIPPIRPPEK RQRIPSAYNR 120 FIKAEIQRIK ANNPDISHRE AFSTAAKNWA HLPHIHLGQK LDGNNKQSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 4e-70 | YABBY family protein |