PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534439.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 384aa MW: 44216.3 Da PI: 6.5112

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.8	3e-51	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv +k++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_023534439.1 16 VPPGFRFHPTEEELLHYYLRKKVGFQKIDL-DVIRDVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKII 109 69**************************.9***********964444222455********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ +gl+ktLvfykgrap+g+k+dW+mheyrl XP_023534439.1 110 YT-GSRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 144 9.999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MAEQDMTLSL NGHSQVPPGF RFHPTEEELL HYYLRKKVGF QKIDLDVIRD VDLNKLEPWD 60 IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKIIY TGSRRIGLRK 120 TLVFYKGRAP HGQKSDWIMH EYRLDDSDRD NNICNSIGEA QLAEDGWVVC RVFKKKNYHK 180 SIDSPKTSPT SMDSEVHLQN SNNEEGVLDQ ILQYMGRTCK LEMESFSNFN NNNNNIQSSR 240 LILSPKNNNT ERTIDKSFMH LPRLDSPTTI PSIIPLHQLE TFDHNIIFNH ELLPETTDPS 300 PEPVRGSPVV KLNNWVAFDR LVASQLNGHE ERTIEDDEDE QQQQHHHDMQ VSSRGLGYGH 360 ENDIWGFTKS SSPSSLDPLS HLSV

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MAEQDMTLSL NGHSQVPPGF RFHPTEEELL HYYLRKKVGF QKIDLDVIRD VDLNKLEPWD  60
IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKIIY TGSRRIGLRK  120
TLVFYKGRAP HGQKSDWIMH EYRLDDSDRD NNICNSIGEA QLAEDGWVVC RVFKKKNYHK  180
SIDSPKTSPT SMDSEVHLQN SNNEEGVLDQ ILQYMGRTCK LEMESFSNFN NNNNNIQSSR  240
LILSPKNNNT ERTIDKSFMH LPRLDSPTTI PSIIPLHQLE TFDHNIIFNH ELLPETTDPS  300
PEPVRGSPVV KLNNWVAFDR LVASQLNGHE ERTIEDDEDE QQQQHHHDMQ VSSRGLGYGH  360
ENDIWGFTKS SSPSSLDPLS HLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	1e-107	NAC family protein