PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534379.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Trihelix
Protein Properties Length: 675aa    MW: 73476.2 Da    PI: 7.0205
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix100.11.8e-31103187187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW++qe+laL+++r++m++++r++ lk+plW+evs+k+ e g++rs+k+Ckek+en++k+yk++keg+++r  ++ +t+++f+qlea
  XP_023534379.1 103 RWPRQETLALLRIRSDMDSAFRDATLKGPLWDEVSRKLTELGYNRSAKKCKEKFENVQKYYKRTKEGRGGR--QDGKTYKFFTQLEA 187
                     8********************************************************************98..56667*******85 PP
2trihelix103.81.3e-32506591187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+k evlaLi++r  +e+r++++  k+ lWee+s+ m++ g++rs+k+Ckekwen+nk++kk+ke++kkr  e+s+tcpyf++l+a
  XP_023534379.1 506 RWPKPEVLALIKLRGGLETRYQETGPKGLLWEEISAGMQRMGYKRSAKRCKEKWENINKYFKKVKESNKKR-REDSKTCPYFNELDA 591
                     8*********************************************************************8.78999*******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 675 aa     Download sequence    
MEPAAEPGSG SGSGLELPPS QSQFTVSPPD ITTPSLTVDA ITDSQQVEVA SPISSRPPAS  60
SSLNYEEIFR LSTTVQMPVV GDDEALAGDD ADRTTGSSGA GNRWPRQETL ALLRIRSDMD  120
SAFRDATLKG PLWDEVSRKL TELGYNRSAK KCKEKFENVQ KYYKRTKEGR GGRQDGKTYK  180
FFTQLEALHN ASASASASAS ASAVASTPNV AVSCFSAPPI GFGISNPTPI SSVKISSTAI  240
SSQTPMGIYS PADHFTVRPP PVTAPMGVSF SSNTSSASTE EDDNDEDEMG FDVDLEGEPS  300
SVAGTSRKRR RGVVKGSGSR THKMMMEFFE GLMKEVMHKQ EVMQQKFLEA MGKREQDRMI  360
REETWKRQEM ARLSREQERM AQERTISASR DAAIIAFLQK FTGQTIQLPV VNIPSSVAPH  420
HQHQQHDVPV PTPTPVPVPV SVPVPLSPVP PPPLQPQTAL SLQQNKKTAQ DQNPPPSNTL  480
SPLDQPMPYQ EISHGGDGSA EPFSSRWPKP EVLALIKLRG GLETRYQETG PKGLLWEEIS  540
AGMQRMGYKR SAKRCKEKWE NINKYFKKVK ESNKKRREDS KTCPYFNELD ALYRKKILGS  600
SSGGGGGSDG GGSGSRSSFS DTSKTEQDPI KNMDTEMAPS TATETSQTIL TEGLSASLFG  660
EGTEEQPATS TKKTL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1307311RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-59Trihelix family protein