PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533988.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 593aa MW: 65719.5 Da PI: 7.6728

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.9	8.4e-09	418	452	16	55
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +N++f Lr+++P a +K++Ka+iL +veY+k+L+ XP_023533988.1 418 LNDKFIILRSIVPFA-----TKMDKASILGDTVEYLKHLR 452 7************.....9***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MLIKMEGLLQ LAVQSVEWTY SLYWRFSTQH RVLVWGDGFY NGPIKTTKTL HPAAATDFTG 60 HHQQQQQQQL QLQLQAASLS LQRTHQLRDL YNSLSAADSS THTHPLRRPS AALSPEDLTE 120 SEWFYLLCLS FSFPPGLGLP GKAFAKNKHV WITGANEIDS KIFSRAILAK SAGIKTVVCI 180 PVMDGVVELG TTDKVNEDIA LVQHMKSVFA ATQWAAPKPA LSQLSTSNSA TSLEHYTNRK 240 ELEDEMDSDS STSNTNSNSN SNAAGGGEPS ELIMQLELSE DIRLGSRSPD DTSNNFLPLP 300 HSPPPHFHIH PPPLGNSPAA VAVLTEEDTH YSNTLSALLL NQSSRWPDSY SITTVTCSTI 360 SAFSKWTRCS DLRRVSTGTT STSQRLLKNI LHTVPFLHTK HHCDHNPSKS KSCDGRWLND 420 KFIILRSIVP FATKMDKASI LGDTVEYLKH LRQKIQDLEA QNREFESSRK ASFEELQRMD 480 VQSKRKVRIL EGVGDGCTKQ KAVESPKTNL QVSIIGSEGL LEVQCPYKEG LLLDILLILQ 540 GLRIETTAVR SSSSNGVFIA ELRAKVKEGM DGKKASILEV KRAIQQIIPC IDT

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MLIKMEGLLQ LAVQSVEWTY SLYWRFSTQH RVLVWGDGFY NGPIKTTKTL HPAAATDFTG  60
HHQQQQQQQL QLQLQAASLS LQRTHQLRDL YNSLSAADSS THTHPLRRPS AALSPEDLTE  120
SEWFYLLCLS FSFPPGLGLP GKAFAKNKHV WITGANEIDS KIFSRAILAK SAGIKTVVCI  180
PVMDGVVELG TTDKVNEDIA LVQHMKSVFA ATQWAAPKPA LSQLSTSNSA TSLEHYTNRK  240
ELEDEMDSDS STSNTNSNSN SNAAGGGEPS ELIMQLELSE DIRLGSRSPD DTSNNFLPLP  300
HSPPPHFHIH PPPLGNSPAA VAVLTEEDTH YSNTLSALLL NQSSRWPDSY SITTVTCSTI  360
SAFSKWTRCS DLRRVSTGTT STSQRLLKNI LHTVPFLHTK HHCDHNPSKS KSCDGRWLND  420
KFIILRSIVP FATKMDKASI LGDTVEYLKH LRQKIQDLEA QNREFESSRK ASFEELQRMD  480
VQSKRKVRIL EGVGDGCTKQ KAVESPKTNL QVSIIGSEGL LEVQCPYKEG LLLDILLILQ  540
GLRIETTAVR SSSSNGVFIA ELRAKVKEGM DGKKASILEV KRAIQQIIPC IDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	4e-45	bHLH family protein