PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533599.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 693aa MW: 76015.4 Da PI: 4.8591

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.4e-12	510	555	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_023533599.1 510 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 555 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MTDCRLPSVM NFWADENASM MDAFMSTDLN SFWVTPPQPQ QQQQQLPQQP YASVSAASDP 60 SKGVGQSLPP SSMAVFNQET LQQRLQALIE GAQESWTYAI FWQSSYDCSG ATVLGWGDGY 120 YKGEEDKGKE KAKSSTSKSE QEYRKKVLRE LNSLISGSPT SEDDAVDEVV TDTEWFFLVS 180 MTQSFVSGVG LPGQAFFDSN PIWVAGSDRL AGSFCERARQ GQVFGLQTVV CIPSTNGVVE 240 LGSSELICQS SDLMNKVRVL FNFNNLEVET WPISGVDQGE NDPSSLWITE PSNAIEIKDP 300 ATVSSNNNNN NNNPVASAPT PTTTNSQPIS KITSQIETPK SSVVTETPTS VPPSQNSHRQ 360 SQAVQTQSFF TRELNFSEFG YDNSSLKDGN SHSLKPESGE ILNFGESKRS SFPKTDTLPS 420 GNSQFGADEN KKRSPPSRGS NEEGMLSFTS GVILPSSGAL KSGGGIGDSD HSDLEASVIR 480 EVESSRAVEP EKRPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNVSKMD 540 KASLLGDAIS YINELRGKLQ TAESDKEDLQ KQLDSVKKLM MSNKDSCIST SNQPPPDEDI 600 KASNIHGNHS GIETDVDVKI ISWDAMIRIQ SSKKNHPAAR LMAALEELDL DINHASISVV 660 NDLMIQQATV KMSRLYTQEQ LRLALSSKLG APR

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MTDCRLPSVM NFWADENASM MDAFMSTDLN SFWVTPPQPQ QQQQQLPQQP YASVSAASDP  60
SKGVGQSLPP SSMAVFNQET LQQRLQALIE GAQESWTYAI FWQSSYDCSG ATVLGWGDGY  120
YKGEEDKGKE KAKSSTSKSE QEYRKKVLRE LNSLISGSPT SEDDAVDEVV TDTEWFFLVS  180
MTQSFVSGVG LPGQAFFDSN PIWVAGSDRL AGSFCERARQ GQVFGLQTVV CIPSTNGVVE  240
LGSSELICQS SDLMNKVRVL FNFNNLEVET WPISGVDQGE NDPSSLWITE PSNAIEIKDP  300
ATVSSNNNNN NNNPVASAPT PTTTNSQPIS KITSQIETPK SSVVTETPTS VPPSQNSHRQ  360
SQAVQTQSFF TRELNFSEFG YDNSSLKDGN SHSLKPESGE ILNFGESKRS SFPKTDTLPS  420
GNSQFGADEN KKRSPPSRGS NEEGMLSFTS GVILPSSGAL KSGGGIGDSD HSDLEASVIR  480
EVESSRAVEP EKRPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNVSKMD  540
KASLLGDAIS YINELRGKLQ TAESDKEDLQ KQLDSVKKLM MSNKDSCIST SNQPPPDEDI  600
KASNIHGNHS GIETDVDVKI ISWDAMIRIQ SSKKNHPAAR LMAALEELDL DINHASISVV  660
NDLMIQQATV KMSRLYTQEQ LRLALSSKLG APR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	492	500	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-177	bHLH family protein