PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023533586.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 212aa MW: 24807.7 Da PI: 9.0211 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.6 | 1.1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+s+ XP_023533586.1 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSN 59 79***********************************************95 PP | |||||||
2 | K-box | 67.4 | 4.8e-23 | 97 | 172 | 23 | 98 |
K-box 23 kLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + k+++ L+ +R+l+G++L+ +s++eLqqLe+q+e+sl+kiRs+K++ll+e+i +l++ ek+l een aL kk+ XP_023533586.1 97 TMTKKLQHLEVCKRKLMGDSLDLCSMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKV 172 5899*********************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSNC 60 SMNKTIDRYQ NRTKEIMCTN NQGLEDVQLE KEFDSFTMTK KLQHLEVCKR KLMGDSLDLC 120 SMEELQQLER QIERSLTKIR SRKYQLLKEE ITKLKEEEKM LLEENAALLK KVGSEWKHQD 180 EAMDVETQLF IGPSDRRGGS GFLCRYLHNQ PT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 9e-57 | MIKC_MADS family protein |