PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023532978.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 510aa MW: 57408.3 Da PI: 7.5446 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.7 | 4.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl XP_023532978.1 14 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++ XP_023532978.1 67 RGRFTPEEEKLIISLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89********************.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 510 aa Download sequence |
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TPEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRRPN 120 SIAPATTTMT TTTVPTTNTE HIQLSSNPHQ LNFLTQDLTT KQLSLHQETL FPTLFTFNTS 180 SQELFHDTLG LNPDTTTTWH LNHQYHHHHH HHPFLSAVLD PEIELGASTT GATSVMNNTN 240 SYLPPLIENI ESLVGMDDEG EMALECLQRQ DVNDWVVESS QPQNSNFLFW ENVEGSLGGE 300 EVIAPTSNST WKGFFVAADS SARAVADHFV KMIIPEKNRR EISKYLFQEG VCYAKKDFNL 360 AKHPEIDVPN LQVIKLMQSF KSKEYVRETF AWMHYYWYLT NDGIEFLRTY LNLPSEIVPA 420 TLKKQAKPAG RPFGGPSGDR PRPSRFDGER RFGGDRDGYR GGPRGSGGDF GDKGGAPADY 480 RPSFGGPGGR PGFGRGAGGY GGAPAPSNLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63910.1 | 8e-91 | MYB family protein |