PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532787.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Protein Properties

Length: 492aa MW: 55219.8 Da PI: 7.0826

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58	1.7e-18	124	213	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l++s+v + ++ lp f++++ + ++ t++le+e gr+++vk+i k++ l++GW++F a++L egD++vF+l+ ++f +v XP_023532787.1 124 FVKSLVRSHVASCFWMGLPAVFCKSYLPV--RDSTMILENEAGRQFQVKYIAHKTG----LSAGWRQFSAAHKLLEGDVLVFQLVAPTKF--KVY 210 89**********************644..5669***********655555....*********************9987777..777 PP EE- CS B3 96 vfr 98 v+r XP_023532787.1 211 VIR 213 766 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MEYEGTGKNA VSLRSSVAAV LEVEDDDGDM TLAQLSRNPR DRLASSSGKT RKQMEDNPML 60 QKVKQRLADW KTSHAVTGPG GKFMSFEQNK AAYEEQCSPG EFKSSAVMRA LEVRSKLEQE 120 FPSFVKSLVR SHVASCFWMG LPAVFCKSYL PVRDSTMILE NEAGRQFQVK YIAHKTGLSA 180 GWRQFSAAHK LLEGDVLVFQ LVAPTKFKVY VIRTCDVTEM DGNLGLLNLE SHTKQSDAGK 240 DAENKGDAAG DISIKKRAKS GVPDTTERLR NPSPLRSRPR QQVAAEHSEH TSEEVVSEIV 300 EVFSFYQPAI PFKKVKSFED FNIVIDGISI NAELPRDLRK RYYKLCCSQD MFLHENLIPG 360 MNRNLVTGVI SETITIANAI KACDLSTSRE EFSSWDKTLR AFQLFGMNVG FLRNRLHRLA 420 NLAYESENAL DVRTLVDAKN DQVHVHDEIR NIETKLVELK EACDKFGAAI DGLESKAEVY 480 KSKFLEEVSA PW

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MEYEGTGKNA VSLRSSVAAV LEVEDDDGDM TLAQLSRNPR DRLASSSGKT RKQMEDNPML  60
QKVKQRLADW KTSHAVTGPG GKFMSFEQNK AAYEEQCSPG EFKSSAVMRA LEVRSKLEQE  120
FPSFVKSLVR SHVASCFWMG LPAVFCKSYL PVRDSTMILE NEAGRQFQVK YIAHKTGLSA  180
GWRQFSAAHK LLEGDVLVFQ LVAPTKFKVY VIRTCDVTEM DGNLGLLNLE SHTKQSDAGK  240
DAENKGDAAG DISIKKRAKS GVPDTTERLR NPSPLRSRPR QQVAAEHSEH TSEEVVSEIV  300
EVFSFYQPAI PFKKVKSFED FNIVIDGISI NAELPRDLRK RYYKLCCSQD MFLHENLIPG  360
MNRNLVTGVI SETITIANAI KACDLSTSRE EFSSWDKTLR AFQLFGMNVG FLRNRLHRLA  420
NLAYESENAL DVRTLVDAKN DQVHVHDEIR NIETKLVELK EACDKFGAAI DGLESKAEVY  480
KSKFLEEVSA PW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-34	B3 family protein