PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023532692.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | YABBY | ||||||||
Protein Properties | Length: 157aa MW: 17401.7 Da PI: 8.6228 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 137.3 | 1.8e-42 | 26 | 157 | 2 | 134 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaesh...ldeslkeelleelkveeenlksnvekeesas 93 ++ s+eq+Cyv+Cn C+t+lavsvP +slfk+vtvrCGhCt+ll vn++ ll++ ++ l++s+ + ++ l++ + + + +++ +a+ XP_023532692.1 26 HHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGL--LLPSANQfhqLGHSFFSPSHNILENIPTPNSNYLINQFAAT 118 67889*****************************************777665..55555540015566555533333333333222333333333 PP YABBY 94 tsvssekl.senedeevprvppvirPPekrqrvPsaynrfik 134 ++ + + s+ +e+pr+p ++rPPekrqrvPsaynrfik XP_023532692.1 119 NT---FGMpSRGVADELPRPPVINRPPEKRQRVPSAYNRFIK 157 33...3332778899****999*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MSSSSSSPTS STTTTTQQQQ QQQLDHHLPS PEQLCYVHCN ICDTVLAVSV PCSSLFKTVT 60 VRCGHCTNLL PVNMRGLLLP SANQFHQLGH SFFSPSHNIL ENIPTPNSNY LINQFAATNT 120 FGMPSRGVAD ELPRPPVINR PPEKRQRVPS AYNRFIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 6e-39 | YABBY family protein |