PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532610.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 664aa MW: 72498.2 Da PI: 6.5731

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.6e-09	462	499	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_023532610.1 462 FEHflHPYPSDGDKHLLARQTGLSRNQVSNWFINARVR 499 664459******************************88 PP
2	BELL	121.8	2.9e-39	318	389	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r+e+q++k+kLls+l+eVd+rY++y+eq+q+v++sF++v+g g+a pYt lA++a+SrhFrcLkdai+ q+ XP_023532610.1 318 DRNEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDVVMGFGAAVPYTVLAQNAMSRHFRCLKDAITAQL 389 589******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MSQQDYHHAA AAAAAAAAAT LFTPFTNGFD RSSTTAVASH QDPEHQHYNH IAHQIRKEKL 60 RLQGLDPPPS QPSLVGIEEE DDDQSAGAAA LHHVYDSTGI LSEMFNFPQP PRPQAEWYGN 120 RQEINAGDSA VAMQLFLMNP NPRSPPPPPV SSTLHMLLPN PSSGGSFGQF TWGVVPEQET 180 GGGGGDYSSS NPNEGRLSLS LSSSIEAAKA EELRMSDSGL VYQNQHHPQQ VHVGIGSSSN 240 SSLGVVNLLR NSKYVKPARE LLEEFCSVGR DQLKNNNNKL NNSNLTSNSH GGDGGGLSSS 300 TSKDQPQPPP PPALSAADRN EHQRRKVKLL SMLDEVDRRY NHYCEQMQMV VNSFDVVMGF 360 GAAVPYTVLA QNAMSRHFRC LKDAITAQLK HSCEMLGEKD GGGGGRGGSG ITKGETPRLK 420 LLEQRLRQQR AFHQMGMMEQ EAWRPQRGLP ERSVNILRAW LFEHFLHPYP SDGDKHLLAR 480 QTGLSRNQVS NWFINARVRL WKPMVEDMYQ QEAKQHQEQQ EHDHNNNDTD EDTQSSPPPT 540 SSAAPPPPPP PPPPPPPFSY YYSSSSSSSA STAVTQAAAA NCFPANQYES ELQDTCRRVS 600 VLAAPDQQMR TTSGSATSDI PGPTRLIRFG TTAGDVSLTL GLRHAGNIPD NNPSFSLRSE 660 FGGC

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MSQQDYHHAA AAAAAAAAAT LFTPFTNGFD RSSTTAVASH QDPEHQHYNH IAHQIRKEKL  60
RLQGLDPPPS QPSLVGIEEE DDDQSAGAAA LHHVYDSTGI LSEMFNFPQP PRPQAEWYGN  120
RQEINAGDSA VAMQLFLMNP NPRSPPPPPV SSTLHMLLPN PSSGGSFGQF TWGVVPEQET  180
GGGGGDYSSS NPNEGRLSLS LSSSIEAAKA EELRMSDSGL VYQNQHHPQQ VHVGIGSSSN  240
SSLGVVNLLR NSKYVKPARE LLEEFCSVGR DQLKNNNNKL NNSNLTSNSH GGDGGGLSSS  300
TSKDQPQPPP PPALSAADRN EHQRRKVKLL SMLDEVDRRY NHYCEQMQMV VNSFDVVMGF  360
GAAVPYTVLA QNAMSRHFRC LKDAITAQLK HSCEMLGEKD GGGGGRGGSG ITKGETPRLK  420
LLEQRLRQQR AFHQMGMMEQ EAWRPQRGLP ERSVNILRAW LFEHFLHPYP SDGDKHLLAR  480
QTGLSRNQVS NWFINARVRL WKPMVEDMYQ QEAKQHQEQQ EHDHNNNDTD EDTQSSPPPT  540
SSAAPPPPPP PPPPPPPFSY YYSSSSSSSA STAVTQAAAA NCFPANQYES ELQDTCRRVS  600
VLAAPDQQMR TTSGSATSDI PGPTRLIRFG TTAGDVSLTL GLRHAGNIPD NNPSFSLRSE  660
FGGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-112	TALE family protein