PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532264.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 324aa    MW: 36357.6 Da    PI: 9.7678
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532264.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52.1e-15136180347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_023532264.1 136 PWTEEEHKLFLMGLKKYGKGDWRNISRNVVVTRTPTQVASHAQKY 180
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MKWEMEILSP PSLVSTMSWS SGSSDSKSSR WTVAENKMFE NALAIYDTDT PDRWQKVASM  60
IPGKKVGDVI RQYKELEADV SSIEAGLVPI PGYDTSQFTL DWVSSHSYDR FKQSYGVVGK  120
RSTGRSADQE RKKGVPWTEE EHKLFLMGLK KYGKGDWRNI SRNVVVTRTP TQVASHAQKY  180
FIRQLSGGKD KRRASIHDIT TVNLNDTRSP SPVNKKSSLS PEHAAVLPHQ TNSSSSIPQN  240
TFKWDHHQHH HRYQQQHDSG GATVVFNHSN GNIFMSPAVF GASSYSDVGL PEHHHLQKVA  300
GNEAFIGPQN MIFQMQAGHY LPHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.13e-96MYB_related family protein