PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531972.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 310aa    MW: 33647.4 Da    PI: 7.1665
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding445.2e-14102146347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + +q G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_023531972.1 102 PWTEEEHKLFLIGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKY 146
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MRSITAAVNE SAATENGGGG PGEIMLFGVR VVVDSMRKSV SLNNLSQYEQ PHEAADVIAN  60
DDMNDPVSVD HKDVVAAGYA SADDAVPNAC GNRERERKRG VPWTEEEHKL FLIGLQQVGK  120
GDWRGISRNF VKTRTPTQVA SHAQKYYLRR SNLNRRRRRS SLFDITTDTV TAVPMVENSV  180
QLQETASQSH SLTPSNQLEI SKNNVIPAVR TLPFSFGPTP FATPTKNPME KGGGPGEVST  240
EKDGPLKLGL TNSIYSSDQT PNLNSNSAME SSALSLRLAL TSEQREASTR HSTFQSMPSF  300
NNGEGIISAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.25e-63MYB_related family protein