PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023531686.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 138aa MW: 15667.8 Da PI: 8.4411 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.3 | 8.4e-09 | 69 | 115 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT+ + + +a +++ + +W +ar +g g+t++++k ++q + XP_023531686.1 69 SWTAKQNKAFEEALARYDRDtpdRWLNVARAVG-GKTEEEVKRHYQLL 115 6*****************99*************.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MPFKGNNISH CPIGFAPPIN LLNPSYKDHP LPSLLPHTLP FFPLQPFEPF LPYFYTIIMA 60 SMSSHGSASW TAKQNKAFEE ALARYDRDTP DRWLNVARAV GGKTEEEVKR HYQLLVEDVK 120 FIESGRVPYP YRNSGASS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 8e-33 | MYB_related family protein |