PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023531676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 287aa MW: 32531.2 Da PI: 4.6904 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.1 | 4e-20 | 76 | 129 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++ +eq++ Le+ Fe+++++ e++ +LAkklgL+ rqV vWFqNrRa++k XP_023531676.1 76 KKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 129 566899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 129 | 1.9e-41 | 75 | 163 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 ekkrrl++eqv++LE+sFeee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd l+++ +++ ke++ L++ XP_023531676.1 75 EKKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLMSNYDSIIKENAVLKS 163 69**********************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MESGRFLFNP PACGGNMLCL GGAGGGDRFL REGRTMMSMS MNMSMSMQES PNGRPFFRSP 60 DDLYDDEYYD ELYPEKKRRL ANEQVQMLEK SFEEENKLEP ERKSQLAKKL GLQPRQVAVW 120 FQNRRARWKT KQLERDYDVL KASYDLLMSN YDSIIKENAV LKSEKCVAKE LDGGEAPIPR 180 TTSEPLRADT AHVSAPHSGG SGRKAEDRLS SGSDSSAVID DNCLQLIDSG DSYFLSNEYP 240 QRAPLPPGLQ MEHDDRNDNS NYLFSDMFAE TNQQNQEGGP PAWWAWP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 124 | 132 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 8e-70 | HD-ZIP family protein |