PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531675.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

HD-ZIP

Protein Properties

Length: 292aa MW: 33002.8 Da PI: 4.6904

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.1	4.1e-20	75	128	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++ +eq++ Le+ Fe+++++ e++ +LAkklgL+ rqV vWFqNrRa++k XP_023531675.1 75 KKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 128 566899***********************************************9 PP
2	HD-ZIP_I/II	131.4	3.3e-42	74	165	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl++eqv++LE+sFeee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd l+++ +++ ke++ L++e++ XP_023531675.1 74 EKKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLMSNYDSIIKENAVLKSEVA 165 69**************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MESGRFLFNP PACGGNMLCL GGAGGGDRFL RGRTMMSMSM NMSMSMQESP NGRPFFRSPD 60 DLYDDEYYDE LYPEKKRRLA NEQVQMLEKS FEEENKLEPE RKSQLAKKLG LQPRQVAVWF 120 QNRRARWKTK QLERDYDVLK ASYDLLMSNY DSIIKENAVL KSEVASLTEK CVAKELDGGE 180 APIPRTTSEP LRADTAHVSA PHSGGSGRKA EDRLSSGSDS SAVIDDNCLQ LIDSGDSYFL 240 SNEYPQRAPL PPGLQMEHDD RNDNSNYLFS DMFAETNQQN QEGGPPAWWA WP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	131	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	3e-75	HD-ZIP family protein