PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531673.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HD-ZIP
Protein Properties Length: 293aa    MW: 33131.9 Da    PI: 4.6415
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.14.2e-2076129356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++ +eq++ Le+ Fe+++++  e++ +LAkklgL+ rqV vWFqNrRa++k
  XP_023531673.1  76 KKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 129
                     566899***********************************************9 PP
2HD-ZIP_I/II131.43.4e-4275166192
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ekkrrl++eqv++LE+sFeee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd l+++ +++ ke++ L++e++
  XP_023531673.1  75 EKKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLMSNYDSIIKENAVLKSEVA 166
                     69**************************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MESGRFLFNP PACGGNMLCL GGAGGGDRFL REGRTMMSMS MNMSMSMQES PNGRPFFRSP  60
DDLYDDEYYD ELYPEKKRRL ANEQVQMLEK SFEEENKLEP ERKSQLAKKL GLQPRQVAVW  120
FQNRRARWKT KQLERDYDVL KASYDLLMSN YDSIIKENAV LKSEVASLTE KCVAKELDGG  180
EAPIPRTTSE PLRADTAHVS APHSGGSGRK AEDRLSSGSD SSAVIDDNCL QLIDSGDSYF  240
LSNEYPQRAP LPPGLQMEHD DRNDNSNYLF SDMFAETNQQ NQEGGPPAWW AWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124132RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.14e-75HD-ZIP family protein