PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531658.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 239aa MW: 27014.2 Da PI: 9.9794

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.8	7.7e-35	14	147	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr..atksgyWka..tgkdk 90 lppGfrF+Pt+eelv eyLk kv + l++ ++i+ev++++++Pw+ p + e++ +y F+++++ tgk++ r t sgyWka +g+++ XP_023531658.1 14 LPPGFRFQPTEEELVFEYLKCKVFSCALPA-SIIPEVNVCHFDPWEVPgGDWEVEQRCTYLFTNKEE---TGKKNGRwvWTPSGYWKAkpKGRER 104 79*************************9.89***********6677777788899999877...566666654589962268899 PP NAM 91 evlsk....kgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +++s+ ++ vg+k+tLvfy ++r++ g++t Wvmh+yrl XP_023531658.1 105 RIVSSssssQSVSVGMKNTLVFYaNNRNRGGSRTGWVMHQYRL 147 9999877666666******54588899********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MDKLKFGRDG MRGLPPGFRF QPTEEELVFE YLKCKVFSCA LPASIIPEVN VCHFDPWEVP 60 GGDWEVEQRC TYLFTNKEET GKKNGRWVWT PSGYWKAKPK GRERRIVSSS SSSQSVSVGM 120 KNTLVFYANN RNRGGSRTGW VMHQYRLIAT HPQTHTPTVL NNMNKWAICR IFRRKLQSNR 180 YNHHLQLQYY SMSTNHSDGN ASASAASPAP STTSSSSSTS TSFLASSVQQ NSDDHFSAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	2e-38	NAC family protein