PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023531542.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 503aa MW: 54755.5 Da PI: 5.9143 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.9 | 4.2e-17 | 28 | 75 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +l+++v+++G g+W+++ ++ g+ R++k+c++rw ++l XP_023531542.1 28 KGPWTTAEDGILIEYVQKHGEGNWNAVQKHTGLARCGKSCRLRWANHL 75 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 50.3 | 5.5e-16 | 81 | 124 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ l+++++++lG++ W++ a+ ++ gRt++++k++w++ XP_023531542.1 81 KGSFSQEEERLIIELHAKLGNK-WARMAAQLP-GRTDNEIKNYWNT 124 799*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 503 aa Download sequence |
MVESNGEKRR SHGDHQEDGG AAEPALKKGP WTTAEDGILI EYVQKHGEGN WNAVQKHTGL 60 ARCGKSCRLR WANHLRPNLK KGSFSQEEER LIIELHAKLG NKWARMAAQL PGRTDNEIKN 120 YWNTRMKRRQ RAGLPLYPLD LQQEATAFQL RQHQNHRSST TTTTNVSVLR QKLEFDNNIQ 180 NSVSVFNFSS TMNNPQKNFS DGSLFYAAPT NQFKFFTENN GGGGFLPLSP VSPFPQIGQQ 240 LVNNNNSLSP LPLPVLPSQA ALQLSYGGYM GNYNSGLNSM FLGAPFNHLI PGLETELPSI 300 QTPPHSTTPA SSGTSGGDGI MTGANSGLLD VVLLEAEARS RNGKQTKEES SSGGQLKRTA 360 EQGSTEEQGA NNLNVGSVVG SSGGDAAVPA GENHSDGFSS THSSSRKRQR MEPLEEMDSM 420 VDDDLMSLLS NFQTGMPVPE LYPNSNNDDL GINTHNDLSL CETNGNRDED EQQPNVGTTV 480 AVASPVLEWS LGSSCWNNMP SIC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 8 | 12 | KRRSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.1 | 1e-71 | MYB family protein |