PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023531486.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 371aa MW: 41454 Da PI: 6.6967 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.8 | 2.1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ede+l+++++ +G g+W+++++ g+ R++k+c++rw +yl XP_023531486.1 14 KGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 45 | 2.5e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++ E++l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_023531486.1 67 RGPFSQHEEDLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89********************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPD EDEKLLNYIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGPF SQHEEDLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQKG 120 IDPNTHKPVS VSADADNDSE KQLPPTSTSH RSNDNSSDEA IETPLPIITS SNSSSQIYSP 180 TQEFFRFQTT TSGSHRASEL VEFLSFHNLN YVSEIANPNP NSLCFNQTSH LLPPPSIPLK 240 PTWEGTDFTA AAATASGGNS FFDGGNFPWG LPECGKTEKL NPTAIIREDK KWSEIMENPF 300 MMGNTTGEQN QESQSQNESM YVENLSTAAE TEFITESGWQ SPTQRQQAQA SSGAVYNKHL 360 HTLTVSFGHT L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09540.1 | 9e-90 | MYB family protein |