PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531485.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 456aa MW: 50496.3 Da PI: 7.2268

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531485.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.2	6.9e-36	49	191	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_023531485.1 49 LPAGVKFDPTDQELI-EHLEAKVKAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVSRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlrgg 141 799**********.99*****5553334444434666646******.555666799**************73334555545 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_023531485.1 142 ETRWHKTGKTRPVMA-SGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 191 778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MRNSQIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGRPDWVGLP AGVKFDPTDQ 60 ELIEHLEAKV KAKDMKSHPL IDEFIPTIEG EDGICYTHPE KLPGVSRDGL SRHFFHRPSK 120 AYTTGTRKRR KIQTECDLRG GETRWHKTGK TRPVMASGKQ KGCKKILVLY TNFGKNRKPE 180 KTNWVMHQYH LGQHEEEKEG ELVVSKIFYQ TQPRQCNWSD RSLAAAETGF EVVASGSSCS 240 SMAQADEMSP AGGGVGASIS SFSSLDIQHL KSDHFGFGPF RTTSFDEVGM KGRTSGGACS 300 SSGEFELRDH HHQLVVAHND QHRSIVHHHL PTTAFHISNH PSHQISAIIS PPPPPPPLLL 360 LDHDSFHHPS PIIIQNQQFH QQQQQQEEGE SEHHKMGGRS ASGLEELIMG CTSSSSSSIK 420 HHPPESSISS SREADQWMKY SSFWPESDNP NLHGHG

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MRNSQIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGRPDWVGLP AGVKFDPTDQ  60
ELIEHLEAKV KAKDMKSHPL IDEFIPTIEG EDGICYTHPE KLPGVSRDGL SRHFFHRPSK  120
AYTTGTRKRR KIQTECDLRG GETRWHKTGK TRPVMASGKQ KGCKKILVLY TNFGKNRKPE  180
KTNWVMHQYH LGQHEEEKEG ELVVSKIFYQ TQPRQCNWSD RSLAAAETGF EVVASGSSCS  240
SMAQADEMSP AGGGVGASIS SFSSLDIQHL KSDHFGFGPF RTTSFDEVGM KGRTSGGACS  300
SSGEFELRDH HHQLVVAHND QHRSIVHHHL PTTAFHISNH PSHQISAIIS PPPPPPPLLL  360
LDHDSFHHPS PIIIQNQQFH QQQQQQEEGE SEHHKMGGRS ASGLEELIMG CTSSSSSSIK  420
HHPPESSISS SREADQWMKY SSFWPESDNP NLHGHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-137	NAC family protein