PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531484.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 458aa MW: 50786.7 Da PI: 7.3142

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.1	7e-36	53	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_023531484.1 53 LPAGVKFDPTDQELI-EHLEAKVKAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVSRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlrgg 145 799**********.99*****5553334444434666646******.555666799**************73334555545 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_023531484.1 146 ETRWHKTGKTRPVMA-SGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 195 778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MRNSQIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGRPRVYQDW VGLPAGVKFD 60 PTDQELIEHL EAKVKAKDMK SHPLIDEFIP TIEGEDGICY THPEKLPGVS RDGLSRHFFH 120 RPSKAYTTGT RKRRKIQTEC DLRGGETRWH KTGKTRPVMA SGKQKGCKKI LVLYTNFGKN 180 RKPEKTNWVM HQYHLGQHEE EKEGELVVSK IFYQTQPRQC NWSDRSLAAA ETGFEVVASG 240 SSCSSMAQAD EMSPAGGGVG ASISSFSSLD IQHLKSDHFG FGPFRTTSFD EVGMKGRTSG 300 GACSSSGEFE LRDHHHQLVV AHNDQHRSIV HHHLPTTAFH ISNHPSHQIS AIISPPPPPP 360 PLLLLDHDSF HHPSPIIIQN QQFHQQQQEE GESEHHKMGG RSASGLEELI MGCTSSSSSS 420 IKHHPPESSI SSSREADQWM KYSSFWPESD NPNLHGHG

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MRNSQIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGRPRVYQDW VGLPAGVKFD  60
PTDQELIEHL EAKVKAKDMK SHPLIDEFIP TIEGEDGICY THPEKLPGVS RDGLSRHFFH  120
RPSKAYTTGT RKRRKIQTEC DLRGGETRWH KTGKTRPVMA SGKQKGCKKI LVLYTNFGKN  180
RKPEKTNWVM HQYHLGQHEE EKEGELVVSK IFYQTQPRQC NWSDRSLAAA ETGFEVVASG  240
SSCSSMAQAD EMSPAGGGVG ASISSFSSLD IQHLKSDHFG FGPFRTTSFD EVGMKGRTSG  300
GACSSSGEFE LRDHHHQLVV AHNDQHRSIV HHHLPTTAFH ISNHPSHQIS AIISPPPPPP  360
PLLLLDHDSF HHPSPIIIQN QQFHQQQQEE GESEHHKMGG RSASGLEELI MGCTSSSSSS  420
IKHHPPESSI SSSREADQWM KYSSFWPESD NPNLHGHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-138	NAC family protein