PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531436.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

DBB

Protein Properties

Length: 313aa MW: 34322.5 Da PI: 6.9071

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26	1.9e-08	3	43	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +C+ +++ e++ fC ++ lC+ C l+ H+ H+ XP_023531436.1 3 IRCDVCDQAEASVFCSADEAALCHGCDLHVHRAnklagkHS 43 58*****************************7666666665 PP
2	zf-B_box	27.4	6.8e-09	56	92	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg...Ht 38 + C+ ++e ++ fC++++ lC++C ++H g Ht XP_023531436.1 56 PLCDICQERRALVFCQQDRAILCRECDISIH-GtneHT 92 78*****************************.547765 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MKIRCDVCDQ AEASVFCSAD EAALCHGCDL HVHRANKLAG KHSRFSLLQP IKIDSPLCDI 60 CQERRALVFC QQDRAILCRE CDISIHGTNE HTQKHNRFLL TGVKLSSTSF SYQTSSSSNG 120 YNAAMDVKTR SSHACSKSPK MAAHETSSSP SAEKAAPSTS NYKVEDGQAS DGGSFSTSSI 180 SEYLETLPGW CVEEFLDPST AAANRFCKFN GEILAIGNQN LERQQESLGI ERFGNTLEFV 240 GKFSQTGFWN GVGISMKTCR GEKMAVADKI ISNFGSENNS GKIKKQTETN FLFVAAELHI 300 LPYSHSLDCH FIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	7e-59	DBB family protein