PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531047.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 880aa MW: 99634.2 Da PI: 6.3292

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.2	1.1e-17	60	132	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fY+eYA++ GFs ++ + ++sk +g+i+ r+fvC +e +++++ ++ C+a+l++++++++kw+vtk+++eH+H+ XP_023531047.1 60 FYDEYARRFGFSSKIGQLSRSKSDGTIIAREFVCGRECSKRKSADS--------------CDAMLRIELKDQDKWVVTKFVKEHSHS 132 9**********************************999998777..............************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 880 aa Download sequence
MDEMVEVDGM AHPAIVDDSD VDPHEGKINT VEDSSLHDED GIIEPYVGME FESEDDTRTF 60 YDEYARRFGF SSKIGQLSRS KSDGTIIARE FVCGRECSKR KSADSCDAML RIELKDQDKW 120 VVTKFVKEHS HSTVNSSKVH YLRPRRHFAG AAKTITEAYT GSAGVPSGVM SVLMDDNHAS 180 AEKNRGVRTT SSQAEANRSL NNASTMNYAI RNAGRKRTLG RDAQNMLEYF KKMQSENPGF 240 FYAIQLDEDN RMANVFWADA RSRAAYSHFG DAVTLDTMYR VNQFRVPFAP FTGVNHHGQT 300 ILFGCALLLD ESEASFVWLF KTFLTAMNDR QPISITTDQD RAIHVAVAQV FPEARHCISK 360 WHVLREGQQK LAPVCLTHPN FQVELYNCIN LTETIEEFES AWNCIIEKYN LARNDWLQSL 420 YNARAQWVPV YVRDSFFAVI SPNQGYDDSF LDGYVNQQTT LPLFFRQYER ALENWFEKEI 480 EADFDTMCTT PVLRTPSPME KQAANLYTRK IFAKFQEELV ETFVYTANRI EGDAAFSTFR 540 VAKFEDDQKA YVVTLNYSDM KANCSCQMFE YSGILCRHVL TVFTVTNVLT LPSHYILKRW 600 TRNARSGLGS DERAIELHGQ ESLSSRYNSL CREAIRFAEE GATAPETYTV AITALKEAGK 660 KVAIIKKNVA KVAPPSSQVS GASYDERKTS ASASDTTPLL WPRQDEVMRR FNLNNAGAPV 720 QSITDLNYPH ISPVTLHRDD NPPDHMAVLP YLKSMTWVME NKNSTTGNRV AVINLKLQDY 780 SKSPSAESEV KFQLSRVSLE PMLRSMAYIS EQLSTPANKV AVINLKLQDT ETTSGESEVK 840 FQVSRDTLGA MLRSMAYIRE QLSNAAETQS EPPLPKKQRK

Sequence ? help Back to Top

Protein Sequence Length: 880 aa Download sequence

MDEMVEVDGM AHPAIVDDSD VDPHEGKINT VEDSSLHDED GIIEPYVGME FESEDDTRTF  60
YDEYARRFGF SSKIGQLSRS KSDGTIIARE FVCGRECSKR KSADSCDAML RIELKDQDKW  120
VVTKFVKEHS HSTVNSSKVH YLRPRRHFAG AAKTITEAYT GSAGVPSGVM SVLMDDNHAS  180
AEKNRGVRTT SSQAEANRSL NNASTMNYAI RNAGRKRTLG RDAQNMLEYF KKMQSENPGF  240
FYAIQLDEDN RMANVFWADA RSRAAYSHFG DAVTLDTMYR VNQFRVPFAP FTGVNHHGQT  300
ILFGCALLLD ESEASFVWLF KTFLTAMNDR QPISITTDQD RAIHVAVAQV FPEARHCISK  360
WHVLREGQQK LAPVCLTHPN FQVELYNCIN LTETIEEFES AWNCIIEKYN LARNDWLQSL  420
YNARAQWVPV YVRDSFFAVI SPNQGYDDSF LDGYVNQQTT LPLFFRQYER ALENWFEKEI  480
EADFDTMCTT PVLRTPSPME KQAANLYTRK IFAKFQEELV ETFVYTANRI EGDAAFSTFR  540
VAKFEDDQKA YVVTLNYSDM KANCSCQMFE YSGILCRHVL TVFTVTNVLT LPSHYILKRW  600
TRNARSGLGS DERAIELHGQ ESLSSRYNSL CREAIRFAEE GATAPETYTV AITALKEAGK  660
KVAIIKKNVA KVAPPSSQVS GASYDERKTS ASASDTTPLL WPRQDEVMRR FNLNNAGAPV  720
QSITDLNYPH ISPVTLHRDD NPPDHMAVLP YLKSMTWVME NKNSTTGNRV AVINLKLQDY  780
SKSPSAESEV KFQLSRVSLE PMLRSMAYIS EQLSTPANKV AVINLKLQDT ETTSGESEVK  840
FQVSRDTLGA MLRSMAYIRE QLSNAAETQS EPPLPKKQRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein