PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023530757.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 343aa MW: 38570.9 Da PI: 7.3697 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.8 | 8e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++ +G g+W+++++ g+ R++k+c++rw +yl XP_023530757.1 14 KGLWSPEEDEKLFNYIATFGVGCWSSVPKLAGLERCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.4 | 8.9e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_023530757.1 67 RGMFSQQEEDLIISLHEVLGNR-WAQIAAQLP-GRTDNEIKNFWNS 110 788*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MGRNSCCLKS KLRKGLWSPE EDEKLFNYIA TFGVGCWSSV PKLAGLERCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLMKQG 120 IDPATHKPLE ENMEGMQDQK PRMGAAPHHL HGNISNLTIS SNDSNHHYKQ IEDSSHHFVN 180 KIEFDSLSSY FGAPIQHQSS IRSCDQNFLY SSSSFGMPSY SSSEHGNTSR TDFSENSASG 240 LSSFFMNEVK ESSSNSSVVS NYSGFHGKLN NGGYSWEAEN KLESLFQFQT NEVKNMELMK 300 GSSSREETKM IQTQNNSSNF GSYPLMSMSE NAGGGSFGVF HQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G57560.1 | 4e-79 | MYB family protein |