PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023530721.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 294aa MW: 33560 Da PI: 9.3371 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 46.7 | 8.5e-15 | 19 | 109 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt + + +L+ a e++ +l+rg+l+ ++W+ev++++ +er+ r+++qCk++++ l+++yk +k++ ++ + +s +p+f+ l+ XP_023530721.1 19 CWTLDDTSTLVYAWGERHLDLNRGSLRYKHWQEVADAVnschnHERKSIRTAIQCKNRIDTLKRKYKIEKARIQESGGTYVSAWPFFSCLD 109 7**********************************************************************99998889999*****9886 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 294 aa Download sequence |
MALSQPSPSA STFPVREDCW TLDDTSTLVY AWGERHLDLN RGSLRYKHWQ EVADAVNSCH 60 NHERKSIRTA IQCKNRIDTL KRKYKIEKAR IQESGGTYVS AWPFFSCLDS LIGGNSHKSS 120 TPAAVSYCKA LTATTPGLSL FPKIPVGPRS GTKKRRLSHV YGSFCNSHLS QDLNSKHDEG 180 KDGMYSENHF SSPRFKDRDV GYRKLADAIG TIADIFERVE VAKQRHMVEL EMQRMQFVKD 240 LEYQRMQLLM EMHLQMQKIK CSRRDSGAGI KRMDSIGRSS LTWSSTNFEE DCYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G58630.1 | 3e-53 | Trihelix family protein |