PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023530624.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 286aa MW: 31949.2 Da PI: 7.9558 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.9 | 3.1e-15 | 62 | 110 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed l+ ++++G+ +W + +r+ g++R++k+c++rw++yl XP_023530624.1 62 RGPWSPQEDATLKAFIHKHGTAgNWIALPRKAGLNRCGKSCRLRWLNYL 110 89******************99*************************97 PP | |||||||
2 | Myb_DNA-binding | 43.3 | 8.6e-14 | 117 | 159 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T eEd l+ + lG++ W+ Ia+ ++ gRt++++k++w++ XP_023530624.1 117 GGFTLEEDNLICTLYSTLGSR-WAVIASQLP-GRTDNDVKNHWNT 159 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MRSPHVHPPF DHSLSSPFPL PIPHHTLYIH TIAPSMAALS LSKLVSFSMG RAPCCDKATV 60 KRGPWSPQED ATLKAFIHKH GTAGNWIALP RKAGLNRCGK SCRLRWLNYL RPDIKHGGFT 120 LEEDNLICTL YSTLGSRWAV IASQLPGRTD NDVKNHWNTK LKKKFNSFSE RPTPTIAAAT 180 QQNAITNMAF PANAPPYSAA ADWLRLDEQM DGNLMFADTN FDFKHDPEDQ FPMLWNPQEL 240 STSSSNSSLP IEQNQLPFGG NAGEALLSYG FYQYPYGDVM EGLDFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 2e-68 | MYB family protein |