PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023530551.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | CAMTA | ||||||||
Protein Properties | Length: 1090aa MW: 121537 Da PI: 5.9571 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 181.2 | 1.2e-56 | 20 | 136 | 2 | 118 |
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ ++rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+een++fqr XP_023530551.1 20 IEARHRWLRPAEICEILRNYPKFHIASEPPERPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569******************************************************************************************* PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_023530551.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *******************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1090 aa Download sequence |
MADRGSYGLA PRLDIDQLLI EARHRWLRPA EICEILRNYP KFHIASEPPE RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP MSSSYSSSRN QAAFENADSP 180 SPTSTVTSSY EDADTEDTYQ ETSRFHSFST SPLVNNGLLV NKKEAGASNL YFPHSSSNNV 240 EAWPSAPAVE YVPQVQKDGL SSDGGTGVIG SQKTLTSASW EEIFQQCTTG FQTVPSQVLN 300 SWIEPLSSGT VLGQENSIPG KLLAGNSAIK EDFKSSLTMA STCQVPFEDN TSSFSKGHVD 360 QFPDLYSVYD INGKLTEQKS HNATFGSGHA HPSIENKELF SKNFEPQFNE GELYSATRLN 420 SENDISKEGS ISYSLALKQS LVDGEESLKK VDSFSRWVSR ELVEVDDLHM HPSSGLSWST 480 VECGDMVDDS SLSPSLSEDQ LFSITDFSPK STLLDLETEV VIIGKFLGNN HATKCYWSCM 540 FGEVEVPAEV LADGILCCHA PPHSVGQVPF YVTCSNRLAC SEVREFDYLA DSAHDVDVTD 600 VYTAGATEEL HMHLRFERLL STRSSDPPNN LSEGALEKRN LIKKLISIKE EEDCYGEEPN 660 SQNDQNQHQS KESLFIKLMK EKLYSWLIRK VIEDGKGPNI LDDKGQGLIH LAAALGYDWA 720 IRPIVATGVS LNFRDVNGWT ALHWAAFYGR ELTVGTLITL GADPGLPSDP SPGNPSGTTP 780 ADLASVRGQK GIAGFLAESS LTSYISSVSM ADTKKDGVLD ASEGKAVYTA AERKATPIND 840 GFMPGDLSLK DSLTAVCNAT QAADRIHLMF RVKSFQRKQL SERGPDEFGY SDDSAISFVA 900 ARARKSRLSN SPDHAAAVHI QKKFRGWKMR KEFLLIRQRI VKIQAIVRGH QVRKQYKKIV 960 WSVGILDKII LRWRRKGSGL RGFRSDTVAK TPPSVVMEPR EEDDEDFLKK GRRQTEERFQ 1020 KALTRVKSMA QYPEGRDQYR RLLTVVQKCR ETKVSNISIT STSEEIIEGD DMIDIDSLLD 1080 DDALMSMTFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 0.0 | CAMTA family protein |