PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530173.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 276aa    MW: 31315.7 Da    PI: 4.748
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530173.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.5e-112002401055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_023530173.1 200 RRRRERINERLKILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 240
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MEQLRGPIVE DGDQWSSLNG VFTADEEAAT FMAQLFNSTA PDPFMAALDL HNNYCNPMNF  60
CLGELGNDHN GGFNLEEEDY NLQACYEAEF MKLPEEEAAM EQKRHTQLEI NCKKRSRGSR  120
DVSVEKWNER SKKTQKLTSS NNTEEDGNAV HSKQSTSSYC SEDESNASFE LNNSRSNPKE  180
TAKTRASRGS ATDPQSLYAR RRRERINERL KILQNLVPNG TKVDISTMLE EAVQYVKFLQ  240
LQIKLLSSDD LWMYAPIAYN GMDIGLNRTP NTSKEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-47bHLH family protein