PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023529970.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 29264.1 Da PI: 6.5124 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176.6 | 7e-55 | 15 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++ + +i+evd++k+ePwdLp k+k +ekewyfF+ rd+ky++g r+nratk+gyWkatgkd+e+++ XP_023529970.1 15 LPPGFRFHPTDEELITHYLSQKVVSSGFCS-PAIAEVDLNKCEPWDLPGKAKMGEKEWYFFCVRDRKYPSGLRTNRATKAGYWKATGKDREIFK- 107 79*************************877.78***************99999*****************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ lvg kktLvfykgrap+g+k++Wvmheyrl XP_023529970.1 108 GRCLVGFKKTLVFYKGRAPRGQKSNWVMHEYRL 140 999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MEKSEEEEDQ TVMELPPGFR FHPTDEELIT HYLSQKVVSS GFCSPAIAEV DLNKCEPWDL 60 PGKAKMGEKE WYFFCVRDRK YPSGLRTNRA TKAGYWKATG KDREIFKGRC LVGFKKTLVF 120 YKGRAPRGQK SNWVMHEYRL HAQSSAFSQK EWVICRVLKK RSGKKGEETG MSSTVLPPLM 180 ESEASLVTCF SNSMEDGTEL LDKFWSGHFE EEEEDGGGEV WRLKVGSSKG FEEPFGFGAN 240 HHPSPPLDDV HCLWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07680.1 | 2e-89 | NAC family protein |