PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529858.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bZIP

Protein Properties

Length: 400aa MW: 43246.4 Da PI: 8.9377

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529858.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.4	4.8e-16	220	274	4	58
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 kr rr+ +NRe+ArrsR+RK+a + eLe+ v+eL eN+aL k + +++++ + XP_023529858.1 220 AKRVRRMLSNRESARRSRKRKQAHLTELETQVAELRVENSALLKHFNDISQKYNE 274 699*****************************************99999998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MRSMDRVFSV DGIADQFLSS PPRAVPTEPE ESSKLNRSAS EWSFRRFLQE ASVSDSSTSP 60 PPPPASPSPD DRSENKESGE NANQILQKQS NRNEICSSSS ATSRMEKIKA AESVKIGPPC 120 VPSDSGDYQA LLKSKLNLAC AAVALCRGSY MMKAQDSCAS SPLASQSSKG ITSSPCVQKK 180 VGILGSSATI SSSIEQTTDE EDDVVEGEDG TSERKDPAYA KRVRRMLSNR ESARRSRKRK 240 QAHLTELETQ VAELRVENSA LLKHFNDISQ KYNESAVNNR VLKADLETLK AKVQMAEETV 300 KRITGSKPMF YGMSSEGLSM SMQSFDGSPS KTSRDAASNH AADISSADTQ LNCVAKAATV 360 SGKKMVKTGS LRRVASLERL QKRIRGSSGC CEPSGKGDHQ

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MRSMDRVFSV DGIADQFLSS PPRAVPTEPE ESSKLNRSAS EWSFRRFLQE ASVSDSSTSP  60
PPPPASPSPD DRSENKESGE NANQILQKQS NRNEICSSSS ATSRMEKIKA AESVKIGPPC  120
VPSDSGDYQA LLKSKLNLAC AAVALCRGSY MMKAQDSCAS SPLASQSSKG ITSSPCVQKK  180
VGILGSSATI SSSIEQTTDE EDDVVEGEDG TSERKDPAYA KRVRRMLSNR ESARRSRKRK  240
QAHLTELETQ VAELRVENSA LLKHFNDISQ KYNESAVNNR VLKADLETLK AKVQMAEETV  300
KRITGSKPMF YGMSSEGLSM SMQSFDGSPS KTSRDAASNH AADISSADTQ LNCVAKAATV  360
SGKKMVKTGS LRRVASLERL QKRIRGSSGC CEPSGKGDHQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	234	240	RRSRKRK
2	234	241	RRSRKRKQ
3	236	241	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	8e-58	bZIP family protein