PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529671.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 505aa MW: 57058.3 Da PI: 6.5178

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.1	9.7e-09	447	501	1	46
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqk 46 r+rW+teE++ l+++v+++ + W++I + +Rt+ ++k++w++ XP_023529671.1 447 RMRWSTEEEDMLKEGVQRFSSSvnknlPWRKILEFGRhifdDTRTPVDLKDKWRN 501 89****************99*******9999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MRTKSRRGGR SRPSRRSSDS YPSFMASPSV PDRDMPNAED KTLNDEFVSG QDACNAEDNA 60 LNEASRKETH DVSDKEDCFQ KDICIRCDES GGLLVCTEIG CPIALHEYCM SCKPSFDEEG 120 RFYCPYCSYK RALVIVNELR RKAMAAKRKL SDFIDNRMVS GANSPQLGEA GKKKVTEVST 180 CGVDVDLPNH ESSRDQEDMQ VGQNRSNQGE DHARTAGDVQ LSTVMGVNSK NHEGPSVSSV 240 SNGIHSTHEV QPCEDAMNEE GTHQDESLED KEDGKTMEEE NFRFTDDIED KEIVKDQGQP 300 KIPNDEEETA VDDVDLGAGR ASQDTGDGAE QIQPENIHPA SGNNDLKNET FVKKKRFKMK 360 ANRKVDRKDF NSPRMSLRRQ TPDHGTKSPH MQTPKREKTS PHIQTPKPGK DRSTKVEKVS 420 TSGKLKLKPA SPNQFKNLMF HGEKRKRMRW STEEEDMLKE GVQRFSSSVN KNLPWRKILE 480 FGRHIFDDTR TPVDLKDKWR NIVDK

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MRTKSRRGGR SRPSRRSSDS YPSFMASPSV PDRDMPNAED KTLNDEFVSG QDACNAEDNA  60
LNEASRKETH DVSDKEDCFQ KDICIRCDES GGLLVCTEIG CPIALHEYCM SCKPSFDEEG  120
RFYCPYCSYK RALVIVNELR RKAMAAKRKL SDFIDNRMVS GANSPQLGEA GKKKVTEVST  180
CGVDVDLPNH ESSRDQEDMQ VGQNRSNQGE DHARTAGDVQ LSTVMGVNSK NHEGPSVSSV  240
SNGIHSTHEV QPCEDAMNEE GTHQDESLED KEDGKTMEEE NFRFTDDIED KEIVKDQGQP  300
KIPNDEEETA VDDVDLGAGR ASQDTGDGAE QIQPENIHPA SGNNDLKNET FVKKKRFKMK  360
ANRKVDRKDF NSPRMSLRRQ TPDHGTKSPH MQTPKREKTS PHIQTPKPGK DRSTKVEKVS  420
TSGKLKLKPA SPNQFKNLMF HGEKRKRMRW STEEEDMLKE GVQRFSSSVN KNLPWRKILE  480
FGRHIFDDTR TPVDLKDKWR NIVDK