PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529603.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 790aa MW: 90867.5 Da PI: 6.6865

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	99.4	3.7e-31	82	173	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r++tr+gCka+l vk++++gkw+v+ ++ eHnHel+p XP_023529603.1 82 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRtkDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVP 173 9*************************************999888555677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MDNEVIEFDI GLGGGSGRDG DDYSMAMVHD SMEEEEMIDS PPLSGLGCGA GSGEIYLPDG 60 DLLDLEPHEG MEFESEEAAK AFYNSYARRV GFSTRVSSSR RSRRDGAIIQ RQFVCAKEGF 120 RNMNEKRTKD REIKRPRTVT RVGCKASLSV KMHDSGKWVV SCFVREHNHE LVPPDQVHCL 180 RSHRQISGPA KTLIDTLQAA GMGPRRIMSA LIKEYGGISK VGFTEVDCRN YMRNNRQRSL 240 EGDIQLLLDY LRQMHSENPN FFYAVQGEED QWVGNVFWAD PKAQMNYTYF GDTVTFDTTY 300 RSNRYRLPFA PFTGVNHHGQ PVLFGCAFLI NESEASFNWL FRTWLLAMSG HPPMSITTDH 360 DAVIQSAIAQ VFPETRHRFC KWHIFKKCQE MLSHVFLKHP SFEADFHKCV NLTDSIEEFE 420 SCWLSLVDRY DLRDHEWLQT VYSARRQWVP VYLRNTFFAE MSITQRSDSM NSYFDGYVNA 480 STNLSQFFKL YEKALESRNE KEVKADYDTM NTSPVLKTPS PMEKQVSELY TRKLFSRFQD 540 ELVGTLTFMA SKADDNGEVI TYQVAKFGED HKAHYVKFNV VEMRANCSCQ MFEFSGLLCR 600 HILAVFRVTN VLTLPSHYIL KRWTRNAKSN VILEDHVNDI YNNYLESHTV RYITLRHEAF 660 KFIEEGAKTI DTYNVAKDAL QEAVKRVSHT PRNNSKISSI DGRIKADPAN DISYTNHSSS 720 TGQDRSLGIN MSEDDLDKKI NELTNELECA NRKCEVYRSN LFSVLKDIDD HKLQLSIKVQ 780 NIKISMKDSI

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MDNEVIEFDI GLGGGSGRDG DDYSMAMVHD SMEEEEMIDS PPLSGLGCGA GSGEIYLPDG  60
DLLDLEPHEG MEFESEEAAK AFYNSYARRV GFSTRVSSSR RSRRDGAIIQ RQFVCAKEGF  120
RNMNEKRTKD REIKRPRTVT RVGCKASLSV KMHDSGKWVV SCFVREHNHE LVPPDQVHCL  180
RSHRQISGPA KTLIDTLQAA GMGPRRIMSA LIKEYGGISK VGFTEVDCRN YMRNNRQRSL  240
EGDIQLLLDY LRQMHSENPN FFYAVQGEED QWVGNVFWAD PKAQMNYTYF GDTVTFDTTY  300
RSNRYRLPFA PFTGVNHHGQ PVLFGCAFLI NESEASFNWL FRTWLLAMSG HPPMSITTDH  360
DAVIQSAIAQ VFPETRHRFC KWHIFKKCQE MLSHVFLKHP SFEADFHKCV NLTDSIEEFE  420
SCWLSLVDRY DLRDHEWLQT VYSARRQWVP VYLRNTFFAE MSITQRSDSM NSYFDGYVNA  480
STNLSQFFKL YEKALESRNE KEVKADYDTM NTSPVLKTPS PMEKQVSELY TRKLFSRFQD  540
ELVGTLTFMA SKADDNGEVI TYQVAKFGED HKAHYVKFNV VEMRANCSCQ MFEFSGLLCR  600
HILAVFRVTN VLTLPSHYIL KRWTRNAKSN VILEDHVNDI YNNYLESHTV RYITLRHEAF  660
KFIEEGAKTI DTYNVAKDAL QEAVKRVSHT PRNNSKISSI DGRIKADPAN DISYTNHSSS  720
TGQDRSLGIN MSEDDLDKKI NELTNELECA NRKCEVYRSN LFSVLKDIDD HKLQLSIKVQ  780
NIKISMKDSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein