PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023529317.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 314aa    MW: 35485.1 Da    PI: 7.2911
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023529317.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407.2e-13134180455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +hn  +r+RRdriN+++  L++l+P+       K++ a+ L  +++Y+k+Lq
  XP_023529317.1 134 NHNRSDRKRRDRINQKMKDLQKLVPNG-----SKMDRASLLDDTIQYLKQLQ 180
                     7*************************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MSMSHWTVPN WNPMPKYGRS CARGDEQEAA MDAHVEVLFQ TPLTNHSWSQ SDDTLESIVH  60
SSLSRKRTRS NPDCKNEALM SWASMESHGS FKTDDSVEDL AQDDGWVMHK EDDHNMKGKA  120
DGSCSIGRTR AAINHNRSDR KRRDRINQKM KDLQKLVPNG SKMDRASLLD DTIQYLKQLQ  180
AQVQFMYSIR SIVPQMVMPL EIQQQQQQQL QMSLLAAHMG LLNTDSKAPS SSSFPCAAAF  240
PPPPFLLSSI NSTTKPKSNL STSAFVPPTD PFCTFLAQSM DMDFYSKMVT LYCQEVNRTP  300
RQAGKFEGIK EDMH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139144DRKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.14e-24bHLH family protein