PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529048.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 779aa MW: 86620.7 Da PI: 8.0265

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.2e-08	58	100	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_023529048.1 58 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 100 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence
MFHARFSWFL MLRSIIRKSM KDKKTFVAHV GDQGIAASTP DHVIEPPPAK RPTRQWAAWT 60 REEEESFFTA LRQVGKNFEK ITCHVQSKNK DQVRHYYYRL VRRMNKLLAP GLCLDAKNSK 120 DTNAAMLRWW SLLEKYSCKA SKLHLKPRRF KIFVEALEHR LLKDRKKTVR KRPLQGENCP 180 PPIANGVSNQ SRALGHDGLA VKLVLVDTQN IPKLGPRKTV SKRNLNVGIN RGNNGGYPTV 240 LKPSRQRRKS EGGVSSAAYK KWEKAAIAGV SLVADAAEHL ERNVTDENVL RDQNTLGKKS 300 TDPAGSPLLL LPSLQPNSLI DVASTKLKLQ LFPVDDGTRR ALELDKHNPH LELTLSTRKK 360 ISSVLEHLSR KWGNSSAAHG ELMLFPYSIQ RKSLADCQRW AQDSFESAGD VYATIGRPQV 420 FRLRYGWCCN AEHGSVELQT SVPAYCIQDD HVMDSRDIEG RIVDVASIDA QPVNFNKNEV 480 GTLSKNMSTP TAPSETERSI SARPNDDLPR SSNPALNMSW DKKNVADTTI IQRSEDVDDL 540 KSSNGTSLSA GEWADSLTNI SIGDLLSGVS QDVDANCVVT PLAEGTQCLQ QIPFSCDSFD 600 AAIAAHISRQ QNKTVSHPTL LSHASSIFDA EETCNAFSFQ KNPVILHDVS SSFTFSSVRA 660 CGHIARTNSM GSCHMTEDLP RSECSPSEDH IQGDPKDECQ ANPQISETNN IDELADIYWP 720 DSLGPLDLDF PQTNKYHNEE LILGDSLSSL NRLIASSLDA FQSCSFFGFD KKEPSAFNS

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence

MFHARFSWFL MLRSIIRKSM KDKKTFVAHV GDQGIAASTP DHVIEPPPAK RPTRQWAAWT  60
REEEESFFTA LRQVGKNFEK ITCHVQSKNK DQVRHYYYRL VRRMNKLLAP GLCLDAKNSK  120
DTNAAMLRWW SLLEKYSCKA SKLHLKPRRF KIFVEALEHR LLKDRKKTVR KRPLQGENCP  180
PPIANGVSNQ SRALGHDGLA VKLVLVDTQN IPKLGPRKTV SKRNLNVGIN RGNNGGYPTV  240
LKPSRQRRKS EGGVSSAAYK KWEKAAIAGV SLVADAAEHL ERNVTDENVL RDQNTLGKKS  300
TDPAGSPLLL LPSLQPNSLI DVASTKLKLQ LFPVDDGTRR ALELDKHNPH LELTLSTRKK  360
ISSVLEHLSR KWGNSSAAHG ELMLFPYSIQ RKSLADCQRW AQDSFESAGD VYATIGRPQV  420
FRLRYGWCCN AEHGSVELQT SVPAYCIQDD HVMDSRDIEG RIVDVASIDA QPVNFNKNEV  480
GTLSKNMSTP TAPSETERSI SARPNDDLPR SSNPALNMSW DKKNVADTTI IQRSEDVDDL  540
KSSNGTSLSA GEWADSLTNI SIGDLLSGVS QDVDANCVVT PLAEGTQCLQ QIPFSCDSFD  600
AAIAAHISRQ QNKTVSHPTL LSHASSIFDA EETCNAFSFQ KNPVILHDVS SSFTFSSVRA  660
CGHIARTNSM GSCHMTEDLP RSECSPSEDH IQGDPKDECQ ANPQISETNN IDELADIYWP  720
DSLGPLDLDF PQTNKYHNEE LILGDSLSSL NRLIASSLDA FQSCSFFGFD KKEPSAFNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein