PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528946.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 286aa    MW: 31909.7 Da    PI: 9.0034
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3102.32.7e-3241155199
                     EEEE-..-HHHHTT-EE--HHH.HTT................---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh................ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDf 79 
                     f+k ltpsdv+k++rlv+pk++ae++                 ++  +   lt+edesg+ W+++++y+++s++yvltkGW++Fvk+++L++gD 
  XP_023528946.1  41 FEKPLTPSDVGKLNRLVIPKQYAERYfplspssssssaaaatAHSADKALLLTFEDESGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDC 135
                     99***************************9999998888888444447779******************************************** PP

                     EEEEE-SSSEE..EEEEE-S CS
              B3  80 vvFkldgrsefelvvkvfrk 99 
                     vvF+++++++ +l++++ r+
  XP_023528946.1 136 VVFERHRSDGDRLFIGWKRR 155
                     ****9888999999999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MSINHFSQDF HQPLFPSPHL PIMLNNNPKS SLSDHLKQPM FEKPLTPSDV GKLNRLVIPK  60
QYAERYFPLS PSSSSSSAAA ATAHSADKAL LLTFEDESGK LWRFRYSYWN SSQSYVLTKG  120
WSRFVKEKRL DAGDCVVFER HRSDGDRLFI GWKRRSTPSP AEAAVAPSGS GGGCWTRMFY  180
SANPYPSHHH LPSPPYQSPG STLPESSVQS QTVSVGNSKI LRLFGVDLEC QTDMSEPEPP  240
STVGGVSSIS GRDPTRHIFY SHYSSAVPHH MDFTFPQDVK QTKYQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06250.24e-68B3 family protein