PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528744.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 357aa MW: 41312.3 Da PI: 4.3812

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	60.9	4.2e-19	37	165	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lp G+ F Ptd+el ++yL++k+ g++++ v++ vd+y+ eP+ L +++ + +++ ++ F++ +kk+++ rk + g+W+ +++s XP_023528744.1 37 LPLGYVFCPTDQELFQFYLHHKIVGNDTPY--VLPVVDLYSEEPSVLWQNFGGiDDQYLHVFTQLKKKKSRVIRKVG-SHGGTWSGESDAVKIFS 128 689**********************998..8**********855544267788999999998876555555.478********** PP NAM 95 k..kgelvglkktLvfykg.rapkgektdWvmheyrl 128 + ++ l g+ k + + + ++ e+++W+mhey++ XP_023528744.1 129 SddNHILLGTLKRFHYQNPkVGKSNENCSWIMHEYTI 165 954455588888888884313445569******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MDYSDLQSSI HYNCGFLPNF RLQLLPRIMA TAALNQLPLG YVFCPTDQEL FQFYLHHKIV 60 GNDTPYVLPV VDLYSEEPSV LWQNFGGIDD QYLHVFTQLK KKKSRVIRKV GSHGGTWSGE 120 SDAVKIFSSD DNHILLGTLK RFHYQNPKVG KSNENCSWIM HEYTINPDLV LNGNVHDRFV 180 FCKIRQKILY HRREDQAPIS TETIQVHEQA IANPGEETFK INKQFLGELM NPISTETIQV 240 HEQAIANPEE ETFQINEHFH GELMNLISTE TIQVHEQAIA NPEEETFQID EQSLRELMNP 300 ISTESIKIHA QAEDSNEEQM FEINEQFFEE LDDPLEDIDF SCMDDDLSLL DDLPLPW

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MDYSDLQSSI HYNCGFLPNF RLQLLPRIMA TAALNQLPLG YVFCPTDQEL FQFYLHHKIV  60
GNDTPYVLPV VDLYSEEPSV LWQNFGGIDD QYLHVFTQLK KKKSRVIRKV GSHGGTWSGE  120
SDAVKIFSSD DNHILLGTLK RFHYQNPKVG KSNENCSWIM HEYTINPDLV LNGNVHDRFV  180
FCKIRQKILY HRREDQAPIS TETIQVHEQA IANPGEETFK INKQFLGELM NPISTETIQV  240
HEQAIANPEE ETFQINEHFH GELMNLISTE TIQVHEQAIA NPEEETFQID EQSLRELMNP  300
ISTESIKIHA QAEDSNEEQM FEINEQFFEE LDDPLEDIDF SCMDDDLSLL DDLPLPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46590.1	1e-13	NAC family protein