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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023528360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 523aa MW: 56815.2 Da PI: 5.5528 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.5 | 2.7e-09 | 339 | 387 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_023528360.1 339 NSHSLAERVRREKISERMRLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 387 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 523 aa Download sequence |
MNGKDEFEDE CRTSDPMSIS SSWQFANESI GFVSTGNPSV VSNGDLGVSS CPSTSMSNLF 60 TPTVLNDHTN SQSSRFCSGF NEQNSIDDSN VTVVDGEGLS SLRSSSDRIL GMDWNQQSSW 120 MKGVFSGNVP GMFPANLSQL PADSAFIERA ARFSCFNGGV FGAPPAGSFG ISGSNGIHSR 180 GAFGSQELNK VVLEGKEKSP PKTEKESEMS RDRAKQGCVG ESGNESDETG FSGGQDEQCT 240 LGGTIAEPSR EGLCFKKRKR GDRNMELAQV KEAPKQINET AKNGALTRQN GDRDQNPNQN 300 PSFTTNKPAG KQGKQDSQPS DAPKEEYIHV RARRGQATNS HSLAERVRRE KISERMRLLQ 360 DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLATV NPKLDFNIEE LLTKEIMQSK 420 AGPSLFGFPP DLPMPYLPQH PTHHGVIPPC IPNMGSSPDL LRRTINSQLT SLVGGFKEPV 480 QLPNVWENEL HNVVPRNFDV AAPPSGQDVD GSTPPCNNTR AEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.3 | 2e-87 | bHLH family protein |