PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528247.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 324aa    MW: 35608.1 Da    PI: 5.8368
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH451.9e-14138184354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  XP_023528247.1 138 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 184
                     79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MKEEGECFQG FQDHLLMQQF QTMQQNSDVF GVGGGGGGGG GLIFPEVSPM MFTPPWTATT  60
TIPQVHHDPF IPPPPPPSYA SFFNRRNASL QFPYDIGNNS LGIGHMGQPG SCPFGLQAEL  120
SKMSAQEIMD AKALAASKSH SEAERRRRER INNHLAKLRS LLPSTTKTDK ASLLAEVIQH  180
VKELKRQTTL IADVSPVPTE LDELSVDVDA SDEDGKFVIK ASLCCEDRSD LLPQIIKTLK  240
SLRLRTLKAE ITTLGGRVKN VLFITGDDDS SSDQEEAEQQ QHQYSISSIQ EALKGVMEKV  300
CSEDQSSSGS IKRQRTNNHN NVNI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144149ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-75bHLH family protein