PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528084.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 972aa MW: 108454 Da PI: 7.2335

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176	5e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k++l+ +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n +fqr XP_023528084.1 20 QEaQNRWLRPAEICEILRNYQKFQLAPDPPVQPPAGSLFLFDRKALRYFRKDGHKWRKKKDGKTVKEAHEKLKSGSVDVLHCYYAHGEDNDNFQR 114 5559***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+yw+L+e+le+ivlvhy+ev XP_023528084.1 115 RSYWMLDEQLEHIVLVHYREV 135 *****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 972 aa Download sequence
MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF 60 DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML 120 DEQLEHIVLV HYREVNEGYR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP 180 LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGSSDLCG QEIVIIQSAI 240 TDSITHKLID ARLASSGLVK NMVNSGHGLI ADAEVPAAKA VSQRIVQKKK HGLITVPLFG 300 MCTDSQVVDD SFVQVEKTSK YDLNHEGFGE LKKLDSFGRW MDKEIGRDCD DSLMTLDSGN 360 YWCALDAGND EKEVSSLSHH MQLDIDSLGP SLSQDQLFSI SDFSPDWAYS GNVTKVLIVG 420 SFLGSKKLPV ETQWGCMFGE VEVSAEILSN SVLRCQTPLH APGRIPFYVT CCNRLACSEV 480 REFEFREKPP TLSVPNAIKC ASEDELRFQM RLTRLLNLCL EEKWLDCPIK NCEKCKIVGL 540 MKSSRSDIAK WRMMEGISIP LISDGMDPRD FMIQTLLVDK LCEWLACKVH EGTMGTPVLD 600 EEGLGVIHLA AALGYAWTIG PIIASGVSPN FRDSKGRTAL HWASYFGREE TVATLVRLGV 660 SPGAVDDPTS GFPGGQTAAD LASSRGHKGI AGYLAEADLT AHLRSLTDGE NLKDNVKENV 720 NVDETIQTAD VVSSQLAEDE LLSLKGSLAA VRKSVHAAAL IHAAFRARSF RHKQLMGSDK 780 EMIHEESIDL VALGILNKAE KIHYEDYLHV AAVRIQQNYR GWKGRKEFLK IRNRIVKIQA 840 HVRGYQVRKL YRKVIWTVSI VEKAILRWRR KRVGLRGFKA EGATGEVASS HSQVEKSDDY 900 EFLRIGRQLK YADVEKALSR VKSMARSPEA RHQYMRLVTK FHIFKQINDE EPSGSNEDGS 960 SQEIQKEEQN LA

Sequence ? help Back to Top

Protein Sequence Length: 972 aa Download sequence

MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF  60
DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML  120
DEQLEHIVLV HYREVNEGYR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP  180
LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGSSDLCG QEIVIIQSAI  240
TDSITHKLID ARLASSGLVK NMVNSGHGLI ADAEVPAAKA VSQRIVQKKK HGLITVPLFG  300
MCTDSQVVDD SFVQVEKTSK YDLNHEGFGE LKKLDSFGRW MDKEIGRDCD DSLMTLDSGN  360
YWCALDAGND EKEVSSLSHH MQLDIDSLGP SLSQDQLFSI SDFSPDWAYS GNVTKVLIVG  420
SFLGSKKLPV ETQWGCMFGE VEVSAEILSN SVLRCQTPLH APGRIPFYVT CCNRLACSEV  480
REFEFREKPP TLSVPNAIKC ASEDELRFQM RLTRLLNLCL EEKWLDCPIK NCEKCKIVGL  540
MKSSRSDIAK WRMMEGISIP LISDGMDPRD FMIQTLLVDK LCEWLACKVH EGTMGTPVLD  600
EEGLGVIHLA AALGYAWTIG PIIASGVSPN FRDSKGRTAL HWASYFGREE TVATLVRLGV  660
SPGAVDDPTS GFPGGQTAAD LASSRGHKGI AGYLAEADLT AHLRSLTDGE NLKDNVKENV  720
NVDETIQTAD VVSSQLAEDE LLSLKGSLAA VRKSVHAAAL IHAAFRARSF RHKQLMGSDK  780
EMIHEESIDL VALGILNKAE KIHYEDYLHV AAVRIQQNYR GWKGRKEFLK IRNRIVKIQA  840
HVRGYQVRKL YRKVIWTVSI VEKAILRWRR KRVGLRGFKA EGATGEVASS HSQVEKSDDY  900
EFLRIGRQLK YADVEKALSR VKSMARSPEA RHQYMRLVTK FHIFKQINDE EPSGSNEDGS  960
SQEIQKEEQN LA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein