PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023527856.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 288aa    MW: 32620.2 Da    PI: 9.1942
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023527856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.52.4e-13122173155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ +++l+P++   + ++ + a+i   A+e++k+L+
  XP_023527856.1 122 QRMTHIAVERNRRRQMNDHLHVIKSLIPTS---YIQRGDQASIIGGAIEFVKELE 173
                     79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MERLQPPVNP CFYGECSDRV SSEQEFTSLG FEELEDKIPF LQKLQNVESQ SFKQPNFQNL  60
VKLQHFNKPG EKGVGKIQEL VQLYSSPINS ETKDQNEPPN SKETRKRKRW KATKNKEEVE  120
SQRMTHIAVE RNRRRQMNDH LHVIKSLIPT SYIQRGDQAS IIGGAIEFVK ELEQLLEVLE  180
AQRKGRKGAD SGCKGAQSEV GMGSNGRIGE GVCAEMKSEV GEIEVTMIQT HVSLKIRCPK  240
RQGQLLKAIV GLEDLRLSVL HLNITTSQAT ATMLYSFNLK VGVDKRER
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123134RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61950.12e-58bHLH family protein