PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023527855.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 355aa MW: 40017.6 Da PI: 9.4869 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.1 | 3.3e-13 | 122 | 173 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ +++l+P++ + ++ + a+i A+e++k+L+ XP_023527855.1 122 QRMTHIAVERNRRRQMNDHLHVIKSLIPTS---YIQRGDQASIIGGAIEFVKELE 173 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MERLQPPVNP CFYGECSDRV SSEQEFTSLG FEELEDKIPF LQKLQNVESQ SFKQPNFQNL 60 VKLQHFNKPG EKGVGKIQEL VQLYSSPINS ETKDQNEPPN SKETRKRKRW KATKNKEEVE 120 SQRMTHIAVE RNRRRQMNDH LHVIKSLIPT SYIQRGDQAS IIGGAIEFVK ELEQLLEVLE 180 AQRKGRKGAD SGCKGAQSEV GMGSNGRIGE GVCAEMKSEV GEIEVTMIQT HVSLKIRCPK 240 RQGQLLKAIV GLEDLRLSVL HLNITTSQAT ATMLYSFNLK IEDECKLGSA EQIAGAVHQI 300 FSFINDGSQV KSMRRRQISG RTVAVADYGR KGGPLFLPPY FPSKKKERKE ESKEG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 134 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61950.1 | 8e-69 | bHLH family protein |