PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023527741.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Trihelix

Protein Properties

Length: 295aa MW: 34758.5 Da PI: 8.4971

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023527741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	75.6	8e-24	50	132	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ +++r e+++++ ++k++k lWe s+km+e+gf+rs++qCk+kw+nl + yk ++++e ++ ++++p++++l+ XP_023527741.1 50 QWSLQETKEFLTIRAELDQTFMETKRNKLLWEITSSKMKEKGFNRSAEQCKCKWKNLVTHYKGCETMEPEN--L-RQQFPFYTELK 132 7******************************************************************95..3.4589*9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MEGHHPHHLI PLHHQQQFQL RPPSHLHPSL TVSADPTLAA AAAATDRFPQ WSLQETKEFL 60 TIRAELDQTF METKRNKLLW EITSSKMKEK GFNRSAEQCK CKWKNLVTHY KGCETMEPEN 120 LRQQFPFYTE LKAIFGARMQ RMFMAEAESG GSGSKKKMKT LSSDDEEENE DSNGDGGETK 180 VKSRKRKKVK GTMMATDGGG GSGSRLKEIL EDFMNQQMQM EVQWREAFEA REKEREMREM 240 EWRRNMEALE HERIMLERSW REREEQRRMR EEIRGEKRDA LITALLNKIR RDDHM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	188	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	3e-55	Trihelix family protein