PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023527101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 322aa MW: 36465.9 Da PI: 5.6092 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.3e-15 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl XP_023527101.1 20 KGLWSPEEDEKLMRYMLNNGQGCWSDIARNAGLQRCGKSCRLRWINYL 67 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.8e-16 | 73 | 117 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E+el+v+++ + G++ W+ Ia++++ gRt++++k++w++ XP_023527101.1 73 RGAFSPQEEELIVHLHSLIGNR-WSQIASRLP-GRTDNEIKNFWNST 117 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MRKPEVVPGK ENAEKNKYRK GLWSPEEDEK LMRYMLNNGQ GCWSDIARNA GLQRCGKSCR 60 LRWINYLRPD LKRGAFSPQE EELIVHLHSL IGNRWSQIAS RLPGRTDNEI KNFWNSTLKK 120 RLKNNLSSSP YSHESSDPRF DMMYGGIMAM QEHDIMSMNI SMDSSSTSSS SSQLPFSATG 180 HSSFDGSSMA FVDNNFQVAS VAEATNGFLQ APGGGGGGCL TEMGMRMEER FRYECLEGER 240 SMEIEREVVC VPHEEMMNHP PLMNNKSSFG QYLGTNEQNL NVEEMFGDMG SHGHLQDSLK 300 MGNNEWDLES FMQDISSLPH FL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 4e-71 | MYB family protein |