PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 222aa MW: 25003.7 Da PI: 9.8344 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.9 | 1.7e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEdell ++++ G g+W++ ++ g+ R++k+c++rw +yl XP_023526676.1 14 KGRWTAEEDELLTNYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.3 | 1.1e-15 | 67 | 117 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE++ +v++++ lG+ +W+ Ia +++ gRt++++k++w+++l XP_023526676.1 67 RGNITAEEEQMIVKLHNVLGNSlfrfRWSVIAGHLP-GRTDNEIKNYWNSHL 117 7999*****************9**************.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MGRSPCCEKV GLRKGRWTAE EDELLTNYIR ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRTNLKRGNI TAEEEQMIVK LHNVLGNSLF RFRWSVIAGH LPGRTDNEIK NYWNSHLSRR 120 IYTVTRPSAT KSSSPITCLL GIIPVPKRKR DVTCGRREEQ GGIVKGKEED DGKTLGKEVI 180 LRSIMGDGDG EGLGPYEWLD GEIMTLNNGM VKACGKWESM HG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 8e-75 | MYB family protein |